Northeast Cyberteam Members
Joshua Gyllinsky
student
Institution
Joshua Gyllinsky
HPC experience
Some, but I would like to learn more. I am interested in learning both the technical side as well as its application in the computational sciences.
I have used the HPC system at the University of Rhode Island during my undergraduate for computational chemistry research while studying Biology. During my masters I used a local multi-node system for bioinformatics and GPGPU for machine learning.
Interests
- Admin
- accounts
- Cloud/VM
- Cloud
- aws
- azure
- comet
- osg
- gce
- moc
- cyverse
- containers
- Storage
- s3
- ceph
- swift
- HPC
- network
- dtn
- firewall
- ib
- tcp
- sdn
- vpn
- scheduler
- condor
- pbs
- sge
- slurm
- storage
- acls
- permissions
- cifs
- privacy
- gpfs
- quota
- lustre
- nfs
- SoftwareInstallation
- Compiling
- debugging
- conda
- cuda
- parallelization
- vectorization
- dependencies
- OS
- jupyterhub
- profilling
- mpi
- Platform
- kubernetes
- openshift
- openstack
- pip
- rstudio-server
- tuning
- spark
- tensorflow
- DomainSpecific
- AI
- Astrophysics
- BioInformatics
- gatk
- trinity
- ddocent
- DeepLearning
- geographicinformationsystem
- arcgis
- ImageProcessing
- opencv
- Machine-Learning
- scikit-learn
- Molecular-Dynamics
- lammps
- namd
- gromacs
- amber
- charmm
- desmond
- NaturalLanguageProcessing
- Parametersweeps
- ParticlePhysics
- root
- Quantum-Mechanics
- gaussian
- Simulations
- VideoProcessing
- EndUser
- ClusterSupport
- file-transfer
- globus
- nomachine
- ondemand
- parallelization
- putty
- rdp
- samba
- ScienceDMZ
- sftp
- site-specific
- smb
- ssh
- vpn
- x11
- DataManagement
- archive
- CUI
- data-lifecycle
- doi
- ELN
- metadata
- security
- storage
- SoftwareSupport
- bash
- comsol
- environment-modules
- mathematica
- matlab
- mpi
- python
- r
- sas
- scripting
- spss
- stata
- unclassified
- atlas
- backup
- batch jobs
- big data
- bu
- cgroups
- Computational-Chemistry
- containers
- cpus
- cyberInfrastructure
- CyberSecurity
- data handling
- data storage
- data wrangling
- desktops
- distributed computing
- fastx
- filesystem
- gpus
- graphics
- hadoop
- hardware
- hardware architecture
- harvard
- harvardssh
- HPC Cluster build
- hpc operations
- HPCs
- HTNs
- hw/sw integration
- identity
- internet
- job sizing
- julia
- linear programming
- machine learning
- natural language processing
- nese
- networking
- nx
- odyssey
- oodatlas
- parallelism
- performance
- performance tuning
- Personnel Resource Capacity Building
- professional development
- programming
- programming best practices
- provisioning
- resources
- scc
- scheduling
- scientific gateway
- screen
- security
- Security in CyberInfrastructure
- software
- software identity
- Testest
- tier 3
- tmux
- unix environment
- visualization
- web
- xsede