hpc

Resources

Title	Category	Tags	Skill Level
RMACC Website	Website	collaboration, community-outreach, hpc, hpc-getting-started

Projects

Project Title	Project Institution	Project Owner	Tags	Status
Data Visualizations Using the Microsoft HoloLens	University of New Hampshire	Scott Valcourt	graphics, hw-sw-integration, hpc, networking, software-installation, compiling, debugging, os, internet	Finishing Up
Unsupervised learning of topologically ordered phases of matter	Middlebury College	Northeast Cyberteam	gpus, hpc, machine-learning, quantum-mechanics	Complete
C++/17/14 Migration of Path Integral Quantum Monte Carlo Software	University of Vermont	Adrian Del Maestro	hpc, software-installation, compiling, debugging, dependencies, performance, performance-tuning, simulations, quantum-mechanics, programming	Complete
The foundation of terrestrial life: Inferring a total-evidence timeline of vascular plant evolution	University of Vermont	Michael Sundue	hpc	Complete
Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations	University of Vermont	Juan Vanegas	bioinformatics, computational-chemistry, gromacs, hpc, molecular-dynamics, mpi, python, simulations	Complete
Onboarding Interdisciplinary Scientists to a GPU Based Cluster in Vermont	University of Vermont	Northeast Cyberteam	hpc, deep-learning, programming-languages	Complete
Using distributed computing to equilibrate Monte Carlo simulations	Middlebury College	Chris Herdman	distributed-computing, hpc, mpi, quantum-mechanics, simulations	Complete
Analyzing Pathogenic Clinical Isolates Genomes to Identify Horizontal Gene Transfer of Antibiotic-Resistance Genes	University of Maine at Presque Isle	Larry Whitsel	big-data, bioinformatics, data-facing, hpc, hpc-storage, researcher-facing	Complete
Benchmarking Locally-Developed HPC Resources	University of New Hampshire	Scott Valcourt	account, backup, big-data, data-facing, data-management, file-systems, hpc, hpc-cluster-build, hpc-getting-started, hpc-operations, permissions, provisioning, schedulers, slurm, unix-environment	In Progress
Utility poles Geo-Localization and Risk Estimation using Deep Learning	University of Vermont	safwan wshah	ai, arcgis, big-data, conda, cuda, deep-learning, geographic-information-system, gpus, hpc, machine-learning, pip, python, tensorflow, unix-environment	Complete
simulate and design “xenobots”, on the AMD platform	University of Vermont	Andrea Elledge	administering-hpc, amber, big-data, biology, cyberinfrastructure, documentation, file-transfer, github, hpc, programming-languages, research-computing, slurm	In Progress

Users

Name	Roles	Skills	Interests
Scott Valcourt	mentor researcher/educator steering committee rcf	account bash batch-jobs big-data compiling cyberinfrastructure data-lifecycle data-management more...
Brendan Philbin	student facilitator	bash c++ cuda distributed-computing hpc mathematica mpi parallelism more...	bash batch-jobs c++ cuda distributed-computing hpc mathematica mpi more...
Gaurav Khanna	mentor regional facilitator researcher/educator steering committee rcf	astrophysics bash batch-jobs c++ cloud cluster-support compiling cpus more...
Jacob Pessin	mentor	aws bash batch-jobs big-data bioinformatics cloud cloud-storage cluster-support more...
Juan Vanegas	mentor	bash batch-jobs bioinformatics compiling conda environment-modules hpc hpc-cluster-build more...
Justin McKennon	researcher/educator	astrophysics hpc machine-learning particle-physics quantum-mechanics simulations
Rob Harbert	mentor	anaconda array-job batch-jobs big-data bioinformatics biology cluster distributed-computing more...
Torey Battelle	mentor regional facilitator rcf	administering-hpc batch-jobs computational-chemistry dft hpc quantum-mechanics research-computing research-facilitation more...	anaconda cluster-management cui hpc-tools hw-sw-integration interconnect jupyterhub machine-learning more...
Jeff Dusenberry	mentor rcf	batch-jobs cpus cyberinfrastructure debugging fortran gpus hpc hpc-tools more...

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Scott Valcourt	Northeast, Campus Champions	account bash batch-jobs big-data compiling cyberinfrastructure data-lifecycle data-management more...
Galen Collier	Campus Champions, CAREERS	cluster-support cyberinfrastructure data-facing hpc professional-development researcher-facing software-installation unix-environment
Vikram Gazula	Campus Champions, Kentucky	containers cyberinfrastructure distributed-computing hpc researcher-facing science gateway
Bhushan Chitre	Kentucky	cyberinfrastructure hpc hpc-cluster-build hpc-operations unix-environment
Brett Milash	RMACC	bioinformatics hpc python
Anita Orendt	Campus Champions, RMACC	batch-jobs computational-chemistry environment-modules gaussian hpc hpc-getting-started management/professional-development software-installation
Brian Haymore	RMACC	account acls backup bash batch-jobs ceph cgroups cifs more...	account acls archiving aws azure backup bash batch-jobs more...
Kaylea Nelson	Campus Champions, CAREERS	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda data-facing more...
Neil McGlohon	CAREERS	hpc hpc-getting-started mpi programming	distributed-computing hpc parallelism python
Andrew Sherman	Campus Champions, CAREERS	compiling cuda debugging distributed-computing hpc hpc-getting-started matlab mpi more...
Grant Scott	Great Plains	ai aws bash big-data c++ cloud compiling containers more...	cloud data-facing management/professional-development researcher-facing
Chuck Pavloski	Campus Champions, CAREERS	archiving cluster-support cyberinfrastructure data-facing data-lifecycle data-management domain-specific file-systems more...
Jeffrey Nucciarone	CAREERS	archiving bash big-data cluster-support community-outreach cybersecurity deep-learning file-systems more...
Ying Zhang	CAREERS	bioinformatics hpc	bioinformatics deep-learning hpc
Kevin Brandt	Campus Champions, Great Plains	ai batch-jobs cloud-storage cluster-support cyberinfrastructure cybersecurity data-facing data-management more...
Gaurav Khanna	Campus Champions, CAREERS, Northeast	astrophysics bash batch-jobs c++ cloud cluster-support compiling cpus more...
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud cloud-storage cluster-support more...
Juan Vanegas	Northeast	bash batch-jobs bioinformatics compiling conda environment-modules hpc hpc-cluster-build more...
Shawn Sivy	CAREERS	acls backup bash batch-jobs cifs compiling containers cpus more...
Rob Harbert	Northeast	anaconda array-job batch-jobs big-data bioinformatics biology cluster distributed-computing more...
Timothy Middelkoop	Campus Champions, Campus Champions	batch-jobs cloud containers cyberinfrastructure hpc hpc-getting-started python workforce-development
Steven Kuhlo	TRECIS	batch-jobs cluster cluster-management cluster-support cpu-architecture cpus cyberinfrastructure desktop more...
Lakitha Wijeratne	TRECIS	hpc image-processing machine-learning matlab python slurm	c++ image-processing machine-learning matlab neural-networks programming-languages python slurm more...
Torey Battelle	At-Large, Campus Champions, MINES, RMACC	administering-hpc batch-jobs computational-chemistry dft hpc quantum-mechanics research-computing research-facilitation more...	anaconda cluster-management cui hpc-tools hw-sw-integration interconnect jupyterhub machine-learning more...
Kevin Bryan	Campus Champions	account bash c c++ cluster-management compiling debugging dependencies more...	archiving data-transfer deep-learning professional-development security
Charles Forsyth	Campus Champions	account acls administering-hpc anaconda aws backup bash batch-jobs more...	administering-hpc data-facing general management/professional-development research-computing researcher-facing systems-facing
Ben Lynch	Campus Champions	ceph computational-chemistry cpus gpus hpc machine-learning neural-networks s3
Kali McLennan	Campus Champions, Great Plains	acls array-job bash cgroups cifs cloud cluster-management cluster-support more...
Ric Anderson	Campus Champions	account acls administering-hpc backup cluster cluster-management deployment dtn more...
Jeff Dusenberry	Northeast	batch-jobs cpus cyberinfrastructure debugging fortran gpus hpc hpc-tools more...
Michael Kyle	Campus Champions	bash cyberinfrastructure cybersecurity documentation hpc hpc-getting-started htc python more...	anaconda arcgis bash community-outreach conda cyberinfrastructure cybersecurity data-analysis more...
Jason Wells		administering-hpc api bash batch-jobs biology cloud cluster cluster-management more...

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