Featured Projects

Recruiting

Portal Development

community-outreach, documentation, professional-development, web-development, workforce-development

On Hold

A GIS based model for wildlife conservation in Sri Lanka

mpi, performance, python

In Progress

Learning dynamical systems with GPU-enabled scientific machine learning

machine-learning

In Progress

Optimization and Parallelization of A Numerical Gravitational-Wave Model

gravitational-waves

In Progress

Genome Sequencing of the Bornean Rock Frog

big-data, bioinformatics, genomics

Complete

Using Agent Based Models on small world networks to understand disease transmission

python

Complete

UVM Art and AI Initiative

image-processing, visualization, web-development

Complete

Using distributed computing to equilibrate Monte Carlo simulations

distributed-computing, hpc, mpi, quantum-mechanics, simulations

Complete

Tracing Oceanic Pathways using High Resolution Model Output

oceanography

Complete

Research Computing "helpdesk"

web-development, programming

Complete

Transient cooling of composite spherical moving droplet at high temperature with phase change and non-homogeneous boundary conditions

bash, batch-jobs, job-sizing, open-ondemand, openfoam, parallelism, parameter-sweeps, performance, performance-tuning

Complete

Incorporating Hytools into the current image processing pipeline to produce better vegetation maps that will account for radiometric signals and will parallelize workflow

big-data, geographic-information-system, hpc-operations, image-processing, python, r, researcher-facing

Complete

Analyzing Pathogenic Clinical Isolates Genomes to Identify Horizontal Gene Transfer of Antibiotic-Resistance Genes

data-facing, big-data, hpc, researcher-facing, bioinformatics, hpc-storage

Complete

Deep Learning High-Resolution Land Cover Mapping for Vermont

arcgis, big-data, distributed-computing, geographic-information-system, image-processing, machine-learning, parallelism, python

Complete

Benchmarking Locally-Developed HPC Resources

account, backup, big-data, data-facing, data-management, file-systems, hpc, hpc-cluster-build, hpc-getting-started, hpc-operations, permissions, provisioning, schedulers, slurm, unix-environment

Complete

Utility poles Geo-Localization and Risk Estimation using Deep Learning

ai, arcgis, big-data, conda, cuda, deep-learning, geographic-information-system, gpus, hpc, machine-learning, pip, python, tensorflow, unix-environment

Complete

Big Data Portal For Sharing Real-world Bioinformatics Data Sets to the Public Domain

big-data, bioinformatics, data-facing, data-management, data-wrangling, hpc-storage, metadata, science gateway, storage (d-facing), web-development

Complete

Uncertainty Quantification for Urban Air Quality Modeling in Clermont-Ferrand, France

cluster, collaboration, hpc-getting-started, monte-carlo, python, simulations

Complete

UVM Art + AI Research Group Phase 2 (2021)

ai, cluster, collaboration, cuda, python, supercomputing, visualization

Complete

AMD GPU-accelerated design tools for creating novel lifeforms

programming-for-hpc, supercomputing, support, training

Complete

Action of Hecke operators on spaces of modular forms

cybersecurity, open-source, research-computing, research-software

Complete

Simulate and design “xenobots”, on the AMD platform

administering-hpc, amber, big-data, biology, cyberinfrastructure, documentation, file-transfer, github, hpc, programming-languages, research-computing, slurm

Complete

Using Long Short Term Memory to Obtain Particle Attributes during the Encapsulation Process of High Temperature Phase Change Materials

deep-learning, machine-learning, matlab, openfoam

Complete

Bearing Condition Monitoring using Machine Learning

ai, cluster, collaboration, data-analysis, data-transfer, machine-learning, neural-networks, programming

Complete

Flexible Material Handling using a Vision-Guided Industrial Robot

documentation, domain-specific, entrepreneurship, hardware, image-processing, programming, project-management

Complete

Developing Portable and Reusable Computational Biology Modules

bioinformatics, cloud, data-reproducibility, docker, genomics

Complete

Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations

bioinformatics, computational-chemistry, gromacs, hpc, molecular-dynamics, mpi, python, simulations

Complete

Data Visualizations Using the Microsoft HoloLens

compiling, debugging, graphics, hpc, hw-sw-integration, internet, networking, os, software-installation

Complete

Light Propagation in a Temporal Focusing Microscope using Matlab

matlab, parallelization, vectorization

Complete

Unsupervised learning of topologically ordered phases of matter

gpus, hpc, machine-learning, quantum-mechanics

Complete

Parallel computing for interactions between fluids and flexible structures with application to suspended longline aquaculture farms

matlab, mpi, parallelism, parallelization, performance, programming

Complete

Student-Developed HPC Cluster for Active Learning

big-data, hardware, hardware-architecture, hpc-cluster-build, hpc-operations, hw-sw-integration

Complete

Student-led Development of Open Source Materials for Hadoop

big-data, ceph, cyberinfrastructure, data-wrangling, hadoop, storage (d-facing)

Complete

Machine learning for material property prediction

big-data, data-wrangling, computational-chemistry, molecular-dynamics, machine-learning, python, gpus

Complete

Individual Based Modeling of Diamondback Terrapins

Complete

Multiscale HPC Modeling, Tutorials and examples

data-management, distributed-computing, visualization, gpus, mpi

Complete

C++/17/14 Migration of Path Integral Quantum Monte Carlo Software

hpc, software-installation, compiling, debugging, dependencies, performance, performance-tuning, simulations, quantum-mechanics, programming

Complete

The foundation of terrestrial life: Inferring a total-evidence timeline of vascular plant evolution

hpc

Complete

Onboarding Interdisciplinary Scientists to a GPU Based Cluster in Vermont

hpc, deep-learning, programming-languages

Complete

Developing Computational Labs for Upper Level Physical Chemistry II Course

computational-chemistry, gaussian

Complete

Using station data and downscaled reanalysis to assess the occurrence of extreme weather

data-management

Complete

BTLE Beaconing to Track Objects

big-data, internet, programming-best-practices, programming, graphics, hardware, hardware-architecture, hw-sw-integration

Complete

Genetics and Big Data

big-data

Complete

CI Learning Resource Repository

resources, cyberinfrastructure, professional-development

Complete

Using Genetic Algorithms and Support Vector Machines in Forest Mapping

big-data, cloud, compiling, data-management, hpc, machine-learning, matlab, neural-networks, openstack, parallelization, programming, workflow

Complete

Large-area Enhanced Forest Inventory modeled on 3-D Airborne Laser Scanning data

data-management, programming, performance, parallelization

Complete

Kerr Black Hole Gravitational Lensing

networking, mpi, astrophysics

Complete

LOBO Fleet Monitoring

big-data, data-access-protocols, data-management, data-wrangling, metadata, file-formats, cloud, openstack, cyberinfrastructure, oceanography, python, software-installation, compiling, debugging

Complete

Grey matter density, heredity, and psychotic disorders with alcohol misuse: Moving toward new diagnostic conceptualization through biotypes.

Complete

Data Presentation for the Living Bridge

data-wrangling, storage (d-facing), hardware, cpus, hpc-storage, vpn, ssh, distributed-computing, cyberinfrastructure