Featured Projects

Recruiting

Big Data Portal For Sharing Real-world Bioinformatics Data Sets to the Public Domain

Data-facing, big-data, data-handling, data-wrangling, Data-Management, storage (d-facing), metadata, bioinformatics, science gateway, Website, storage (s-facing)

Recruiting

Genome Sequencing of the Bornean Rock Frog

big-data, bioinformatics, genomics

New and Recruiting

Utility poles Geo-Localization and Risk Estimation using Deep Learning

big-data, AI, deep-learning, geographic-information-system, arcgis, machine-learning, python, gpus, unix-environment, HPC, tensorflow, pip, conda, cuda

In Progress

LOBO Fleet Monitoring

Cloud/vm, Software-installation, openstack, compiling, debugging, python, cyberinfrastructure

In Progress

Grey matter density, heredity, and psychotic disorders with alcohol misuse: Moving toward new diagnostic conceptualization through biotypes.

In Progress

Northeast Cyberteam Program Portal

In Progress

UVM Art and AI Initiative

Website, visualization, image-processing

In Progress

Using Agent Based Models on small world networks to understand disease transmission

python

In Progress

A GIS based model for wildlife conservation in Sri Lanka

mpi (s-facing), networking, performance, python

In Progress

Multiscale HPC Modeling, Tutorials and examples

data-handling, gpus, mpi (s-facing), distributed-computing, visualization, HPCs (obsolete)

In Progress

Using distributed computing to equilibrate Monte Carlo simulations

quantum-mechanics, Simulations, distributed-computing, HPC, mpi (s-facing)

In Progress

Machine learning for material property prediction

gpus, computational-chemistry, machine-learning, python

In Progress

Facilitating Fusarium Oxysporum Computational Research

data-handling, data-wrangling, slurm, debugging, containers, desktops

In Progress

Student-led Development of Open Source Materials for Hadoop

big-data, data-handling, data-wrangling, storage (d-facing), ceph, hadoop, cyberinfrastructure

In Progress

Transient cooling of composite spherical moving droplet at high temperature with phase change and non-homogeneous boundary conditions

openfoam, batch-jobs, job-sizing, open-on-demand, parallelism, parameter-sweeps, performance, performance-tuning, bash

In Progress

Deep Learning High-Resolution Land Cover Mapping for Vermont

big-data, geographic-information-system, arcgis, image-processing, machine-learning, distributed-computing, parallelism, python

In Progress

Light Propagation in a Temporal Focusing Microscope using Matlab

parallelization, vectorization, matlab

Finishing Up

Data Visualizations Using the Microsoft HoloLens

graphics, hw-and-sw-integration, HPC, network, Software-installation, compiling, debugging, os, internet, networking

Finishing Up

Unsupervised learning of topologically ordered phases of matter

gpus, HPC, quantum-mechanics, machine-learning

Finishing Up

Parallel computing for interactions between fluids and flexible structures with application to suspended longline aquaculture farms

parallelization, parallelism, performance, programming, mpi (r-facing), matlab

Finishing Up

Using station data and downscaled reanalysis to assess the occurrence of extreme weather

data-handling

Complete

Onboarding Interdisciplinary Scientists to a GPU Based Cluster in Vermont

HPC, deep-learning, Programming-languages-and-software-support

Complete

Data Presentation for the Living Bridge

data-handling, data-wrangling, storage (d-facing), Hardware, cpus, storage (s-facing), vpn, vpn, ssh, distributed-computing, cyberinfrastructure

Complete

Creating Tailored Research Computing Environments

big-data, machine-learning, resources, containers, docker, python, r, cpus, gpus, parallelization

Complete

Student-Developed HPC Cluster for Active Learning

big-data, Hardware, hardware-architecture, hpc-cluster-build, HPC-Operations, hw-and-sw-integration, HPCs (obsolete)

Complete

Research Computing "helpdesk"

Website, programming

Complete

Tracing Oceanic Pathways using High Resolution Model Output

oceanography

Complete

Individual Based Modeling of Diamondback Terrapins

Complete

C++/17/14 Migration of Path Integral Quantum Monte Carlo Software

HPC, Software-installation, compiling, debugging, dependencies, performance, performance-tuning, Simulations, quantum-mechanics, programming

Complete

BTLE Beaconing to Track Objects

big-data, graphics, Hardware, hardware-architecture, hw-and-sw-integration, internet, networking, programming-best-practices, programming

Complete

The foundation of terrestrial life: Inferring a total-evidence timeline of vascular plant evolution

HPC

Complete

Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations

HPC, computational-chemistry, Simulations, molecular-dynamics, gromacs, bioinformatics, python, mpi (r-facing)

Complete

Developing Computational Labs for Upper Level Physical Chemistry II Course

computational-chemistry, gaussian

Complete

Kerr Black Hole Gravitational Lensing

network, mpi (s-facing), astrophysics

Complete

Large-area Enhanced Forest Inventory modeled on 3-D Airborne Laser Scanning data

data-handling, parallelization, performance, programming

Complete

Using Genetic Algorithms and Support Vector Machines in Forest Mapping

machine-learning, programming, matlab

Complete

CI Learning Resource Repository

resources, cyberinfrastructure, Professional-Development

Complete

Genetics and Big Data

big-data