Featured Projects

Recruiting

Portal Development

community-outreach, professional-development, workforce-development

In Progress

Genome Sequencing of the Bornean Rock Frog

big-data, bioinformatics, genomics

Halted

A GIS based model for wildlife conservation in Sri Lanka

python, mpi

Complete

Data Presentation for the Living Bridge

data-wrangling, storage, hardware, hpc-storage, vpn, ssh, distributed-computing

Complete

Data Visualizations Using the Microsoft HoloLens

compiling, debugging, networking, os, software-installation

Complete

Light Propagation in a Temporal Focusing Microscope using Matlab

matlab, parallelization, vectorization

Complete

Unsupervised learning of topologically ordered phases of matter

gpu, machine-learning, quantum-mechanics

Complete

Parallel computing for interactions between fluids and flexible structures with application to suspended longline aquaculture farms

matlab, mpi, parallelization, programming

Complete

Student-Developed HPC Cluster for Active Learning

big-data, hardware, hpc-cluster-build, hpc-operations

Complete

Student-led Development of Open Source Materials for Hadoop

big-data, ceph, data-wrangling, hadoop, storage

Complete

Machine learning for material property prediction

big-data, data-wrangling, computational-chemistry, molecular-dynamics, machine-learning, python, gpu

Complete

Individual Based Modeling of Diamondback Terrapins

Complete

Multiscale HPC Modeling, Tutorials and examples

data-management, distributed-computing, gpu, mpi

Complete

C++/17/14 Migration of Path Integral Quantum Monte Carlo Software

software-installation, compiling, debugging, dependencies, performance-tuning, quantum-mechanics, programming

Complete

The foundation of terrestrial life: Inferring a total-evidence timeline of vascular plant evolution

Complete

Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations

bioinformatics, computational-chemistry, gromacs, molecular-dynamics, mpi, python

Complete

Developing Computational Labs for Upper Level Physical Chemistry II Course

computational-chemistry, gaussian

Complete

Using station data and downscaled reanalysis to assess the occurrence of extreme weather

data-management

Complete

BTLE Beaconing to Track Objects

big-data, programming-best-practices, programming, hardware

Complete

Genetics and Big Data

big-data

Complete

CI Learning Resource Repository

resources, professional-development

Complete

Using Genetic Algorithms and Support Vector Machines in Forest Mapping

big-data, compiling, data-management, machine-learning, matlab, neural-networks, openstack, parallelization, programming, workflow

Complete

Large-area Enhanced Forest Inventory modeled on 3-D Airborne Laser Scanning data

data-management, programming, parallelization

Complete

Kerr Black Hole Gravitational Lensing

networking, mpi, astrophysics

Complete

LOBO Fleet Monitoring

big-data, data-access-protocols, data-management, data-wrangling, metadata, file-formats, openstack, oceanography, python, software-installation, compiling, debugging

Complete

Grey matter density, heredity, and psychotic disorders with alcohol misuse: Moving toward new diagnostic conceptualization through biotypes.

Complete

UVM Art and AI Initiative

image-processing

Complete

Onboarding Interdisciplinary Scientists to a GPU Based Cluster in Vermont

deep-learning

Complete

Using Agent Based Models on small world networks to understand disease transmission

python

Complete

Using distributed computing to equilibrate Monte Carlo simulations

distributed-computing, mpi, quantum-mechanics

Complete

Tracing Oceanic Pathways using High Resolution Model Output

oceanography

Complete

Research Computing "helpdesk"

programming

Complete

Transient cooling of composite spherical moving droplet at high temperature with phase change and non-homogeneous boundary conditions

bash, batch-jobs, job-sizing, openfoam, parameter-sweeps, performance-tuning

Complete

Incorporating Hytools into the current image processing pipeline to produce better vegetation maps that will account for radiometric signals and will parallelize workflow

big-data, geographic-information-system, hpc-operations, image-processing, python, r

Complete

Analyzing Pathogenic Clinical Isolates Genomes to Identify Horizontal Gene Transfer of Antibiotic-Resistance Genes

big-data, bioinformatics, hpc-storage

Complete

Deep Learning High-Resolution Land Cover Mapping for Vermont

arcgis, big-data, distributed-computing, geographic-information-system, image-processing, machine-learning, python

Complete

Benchmarking Locally-Developed HPC Resources

backup, big-data, data-management, file-systems, hpc-cluster-build, hpc-operations, permissions, provisioning, schedulers, slurm, unix-environment

Complete

Utility poles Geo-Localization and Risk Estimation using Deep Learning

ai, arcgis, big-data, conda, cuda, deep-learning, geographic-information-system, gpu, machine-learning, pip, python, tensorflow, unix-environment

Complete

Big Data Portal For Sharing Real-world Bioinformatics Data Sets to the Public Domain

big-data, bioinformatics, data-management, data-wrangling, hpc-storage, metadata, science gateway, storage

Complete

Uncertainty Quantification for Urban Air Quality Modeling in Clermont-Ferrand, France

monte-carlo, python

Complete

UVM Art + AI Research Group Phase 2 (2021)

ai, cuda, python

Complete

AMD GPU-accelerated design tools for creating novel lifeforms

training

Complete

Action of Hecke operators on spaces of modular forms

cybersecurity

Complete

Simulate and design “xenobots”, on the AMD platform

administering-hpc, amber, big-data, biology, file-transfer, github, slurm

Complete

Using Long Short Term Memory to Obtain Particle Attributes during the Encapsulation Process of High Temperature Phase Change Materials

deep-learning, machine-learning, matlab, openfoam

Complete

Bearing Condition Monitoring using Machine Learning

ai, data-analysis, data-transfer, machine-learning, neural-networks, programming

Complete

Flexible Material Handling using a Vision-Guided Industrial Robot

hardware, image-processing, programming, project-management

Complete

Developing Portable and Reusable Computational Biology Modules

bioinformatics, data-reproducibility, docker, genomics

Complete

Optimization and Parallelization of A Numerical Gravitational-Wave Model

gravitational-waves

Complete

Learning dynamical systems with GPU-enabled scientific machine learning

gravitational-waves, machine-learning

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