genomics

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Carrie Brown	CAREERS, ACCESS CSSN	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
Diana Toups Dugas	RMACC, SWEETER, Campus Champions	bioinformatics biology genomics proposal-development research-facilitation software-carpentry technical-training-for-hpc training more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Nicholas Panchy	Campus Champions	bash bioinformatics biology conda easybuild genomics modules ondemand more...
Rob Harbert	Northeast	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics geographic-information-system more...
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...
Yun Shen	CAREERS, Northeast, ACCESS CSSN	big-data bioinformatics data-analysis data-science genomics open-ondemand programming PROGRAMMING LANGUAGES FRAMEWORKS AND IDEs more...

Topics from Ask.CI

Affinity Groups

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Users

Name	Roles	Skills	Interests
Rob Harbert	mentor	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics geographic-information-system more...
Yun Shen	mentor	big-data bioinformatics data-analysis data-science genomics open-ondemand programming PROGRAMMING LANGUAGES FRAMEWORKS AND IDEs more...

CI Links

Title	Category	Tags	Skill Level
Recommended Libraries for Cyberinfrastructure Users Developing Jupyter Notebooks	Website	ANALYSES and ALGORITHMS, ai, big-data, data-analysis, machine-learning, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, data-wrangling, github-pages, workflow, FIELD of SCIENCE, astrophysics, data-science, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, GATEWAYS and PORTALS, science gateway, conda, jupyterhub, python	Beginner, Intermediate, Advanced, Expert

Projects

Project Title	Project Institution	Project Owner	Tags	Status
Genome Sequencing of the Bornean Rock Frog	Smith College	Lisa Mangiamele	big-data, bioinformatics, genomics	In Progress
Developing Portable and Reusable Computational Biology Modules		Chris Wilson	bioinformatics, data-reproducibility, docker, genomics	Complete

Blog Entries

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