python

Mentors and Regional Facilitators

Name	Region	Skills	Interests
John Goodhue	CAREERS, Northeast	internet nese programming python sciencedmz storage (d-facing)
Adrian Del Maestro	Northeast	batch-jobs c++ compiling cpus cyberinfrastructure data-management debugging gpus more...
Brett Milash	RMACC	bioinformatics hpc python
Martin Cuma	RMACC	bash batch-jobs c++ compiling debugging distributed-computing environment-modules job-sizing more...	bash batch-jobs c++ compiling comsol conda containers cpus more...
Kaylea Nelson	Campus Champions, CAREERS	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda data-facing more...
Grant Scott	Great Plains	ai aws bash big-data c++ cloud compiling containers more...	cloud data-facing management/professional-development researcher-facing
Carrie Brown	Great Plains	bash batch-jobs conda condor containers data-wrangling distributed-computing fastx more...
Timothy Middelkoop	Campus Champions	batch-jobs cloud containers cyberinfrastructure docker hpc hpc-getting-started kubernetes more...
Keri Toksu	Northeast, Campus Champions	bash batch-jobs hpc-getting-started natural-language-processing open-ondemand programming programming-languages python more...
Thomas Langford	Campus Champions, CAREERS	big-data containers monte-carlo mpi parallelism parallelization particle-physics python more...
George Young	CAREERS	ai conda desktop machine-learning matlab project-management python	julia machine-learning matlab python r
James Deaton	Campus Champions, Great Plains	archiving bash cgroups community-outreach conda containers cyberinfrastructure data-wrangling more...
Rob Coyne	CAREERS	astrophysics python	astrophysics bash condor machine-learning mpi parallelism python scripting more...
Brian Gregor	Northeast, Campus Champions	big-data cpus debugging gpus hardware hardware-architecture job-sizing machine-learning more...
David Oury	Northeast	programming programming-best-practices python r tensorflow unix-environment
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud cloud-storage cluster-support more...
Juan Vanegas	Northeast	bash batch-jobs bioinformatics compiling conda environment-modules hpc hpc-cluster-build more...
Shawn Doughty	Campus Champions, Northeast	account aws batch-jobs cgroups containers cpus desktop fastx more...
Spencer Pruitt	Northeast	batch-jobs computational-chemistry cpus debugging distributed-computing hardware hpc-operations hpc-storage more...
Wirawan Purwanto	Campus Champions, Northeast	bash batch-jobs c++ mpi python scripting
Shawn Sivy	Campus Champions, CAREERS	acls backup bash batch-jobs cifs compiling containers cpus more...
Lakitha Wijeratne	TRECIS	hpc image-processing machine-learning matlab python slurm	c++ image-processing machine-learning matlab neural-networks programming-languages python slurm more...
Mike Renfro	Campus Champions	administering-hpc anaconda bash conda environment-modules fortran git github more...
Jacob Fosso Tande	Campus Champions	administering-hpc azure bash c++ cloud cluster-support community-outreach compiling more...
Kevin Bryan	Campus Champions	account bash c c++ cluster-management compiling debugging dependencies more...	archiving data-transfer deep-learning professional-development security
Ibrahim Sheikh	CAREERS	benchmarking blackhole cloud community-outreach debugging deep-learning dependencies desktop more...	backup benchmarking blackhole community-outreach computational-chemistry connection deep-learning desktop more...
Kali McLennan	Campus Champions, Great Plains	acls array-job bash cgroups cifs cloud cluster-management cluster-support more...
Carrie Brown	CAREERS	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...	hpc-getting-started htc
Nicholas Danes	Campus Champions, MINES	anaconda array-job biology compiling computational-fluid-dynamics cpu-bound distributed-computing domain-specific more...	ai aws azure benchmarking big-data c c++ cloud more...
Michael Kyle	Campus Champions	bash cyberinfrastructure cybersecurity documentation hpc hpc-getting-started htc python more...	anaconda arcgis bash community-outreach conda cyberinfrastructure cybersecurity data-analysis more...
Jason Wells		administering-hpc api bash batch-jobs biology cloud cluster cluster-management more...
Shane Sanders	Campus Champions	bioinformatics c c++ containers cyberinfrastructure hpc hpc-tools machine-learning more...
Mark Perri	Campus Champions	computational-chemistry cyberinfrastructure docker gamess hpc jetstream namd openstack more...	computational-chemistry docker gamess hpc jupyterhub molecular-dynamics namd notebooks more...
Aaron Jezghani	Campus Champions	administering-hpc anaconda bash batch-jobs benchmarking c c++ checkpoint more...
Jason Yalim	Campus Champions	administering-hpc bash benchmarking c c++ computational-fluid-dynamics cpu-bound data-analysis more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api array-job atlas aws more...
Christopher Bl…	Campus Champions	anaconda aws azure bash benchmarking c c++ cloud more...
Nick Dusek	Campus Champions	administering-hpc anaconda bash batch-jobs bioinformatics cloud compiling containers more...
Steve Spicklemire	Campus Champions	c python react	aws big-data computational-chemistry cybersecurity data-analysis gce image-processing machine-learning more...
Davide Del Vento	Campus Champions	c hpc python quantum-computing supercomputing	conda containers hpc hpc-storage jupyterhub open-ondemand programming-languages quantum-computing more...
Swabir Silayi	Campus Champions	amber anaconda array-job bash batch-jobs benchmarking c c++ more...	administering-hpc cloud cluster-management collaboration
Bala Desinghu	CAREERS	ai big-data cloud community-outreach computational-chemistry data-analysis dft hpc more...
Simon Delattre		anaconda bash big-data conda data-transfer data-wrangling deep-learning hpc more...	bioinformatics
Michael Blackmon	Campus Champions	account administering-hpc anaconda bash batch-jobs c c++ cgroups more...
Lauren Hill-Beaton	CAREERS	anaconda arcgis conda geographic-information-system netcdf ondemand pip programming more...	arcgis geographic-information-system python

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Users

Name	Roles	Skills	Interests
John Goodhue	mentor steering committee	internet nese programming python sciencedmz storage (d-facing)
Adrian Del Maestro	mentor researcher/educator steering committee	batch-jobs c++ compiling cpus cyberinfrastructure data-management debugging gpus more...
Ethan Davis	student facilitator	bash batch-jobs big-data matlab python
Brendan Philbin	student facilitator	bash c++ cuda distributed-computing hpc mathematica mpi parallelism more...	bash batch-jobs c++ cuda distributed-computing hpc mathematica mpi more...
Alexander Williams	researcher/educator	bash big-data conda data-facing jupyterhub putty python react more...
Yves Dubief	researcher/educator	big-data molecular-dynamics mpi parallelism performance programming-languages python visualization	batch-jobs molecular-dynamics mpi parallelism performance programming programming-best-practices python more...
Keri Toksu	mentor rcf	bash batch-jobs hpc-getting-started natural-language-processing open-ondemand programming programming-languages python more...
Brian Gregor	mentor rcf	big-data cpus debugging gpus hardware hardware-architecture job-sizing machine-learning more...
David Oury	mentor	programming programming-best-practices python r tensorflow unix-environment
Jacob Pessin	mentor	aws bash batch-jobs big-data bioinformatics cloud cloud-storage cluster-support more...
Juan Vanegas	mentor	bash batch-jobs bioinformatics compiling conda environment-modules hpc hpc-cluster-build more...
Shawn Doughty	mentor rcf	account aws batch-jobs cgroups containers cpus desktop fastx more...
Spencer Pruitt	mentor	batch-jobs computational-chemistry cpus debugging distributed-computing hardware hpc-operations hpc-storage more...
Wirawan Purwanto	mentor rcf	bash batch-jobs c++ mpi python scripting
Daniel Evans	researcher/educator	c c++ cleanup compiling file-formats git programming programming-languages more...
Jesse Franklin	student facilitator	mathematica matlab python
Jack Boynton	student facilitator researcher/educator	ai anaconda api aws bash batch-jobs benchmarking c++ more...
Halina Vercess…	student facilitator	anaconda c c++ documentation github graphics java mathematica more...
Tyler Bloom	student facilitator	bash batch-jobs benchmarking c++ cluster documentation github monte-carlo more...
George Avirappattu	researcher/educator	c++ deep-learning geographic-information-system image-processing java machine-learning python pytorch more...
Jonathan Blanchard	student facilitator mentee	benchmarking cpus desktop documentation file-systems github github-pages gpus more...	benchmarking cpus desktop documentation file-systems github github-pages gpus more...
Sander Cohen-Janes	student facilitator	bash benchmarking collaboration gaussian mathematica python scripting slurm more...	git r
Tolu Oyeniyi	student facilitator	anaconda bash cluster desktop lmod matlab programming programming-languages more...	ai azure cloud cluster-support image-processing jupyterhub linear-programming python more...
Christopher Gilbert	student facilitator	anaconda arcgis astrophysics blackhole community-outreach conda hpc-getting-started jupyterhub more...
Yating Fang	student facilitator	bash c c++ data-analysis deep-learning linear-programming machine-learning matlab more...	anaconda bash big-data c c++ cloud cluster conda more...

Resources

Title	Category Sort descending	Tags	Skill Level
XSEDE Roadmap Training	Learning	schedulers, mpi, globus, r, python, matlab, visualization, xsede	Beginner, Intermediate, Advanced, Expert
Cornell Virtual Workshop	Learning	performance-tuning, parallelism, python, r, matlab, slurm, mpi, cuda, file-transfer, globus	Beginner, Intermediate, Advanced, Expert
HPC University	Learning	performance, python, r, matlab, mpi, compiling, debugging, professional-development, cyberinfrastructure	Beginner, Intermediate, Advanced, Expert
Python	Learning	python	Beginner
Using Linux commands in a python script (and the difference between the subprocess and os python modules)	Learning	programming, python, cluster	Beginner, Intermediate
Quick and Robust Data Augmentation with Albumentations Library	Tool	deep-learning, tools-and-techniques, python	Advanced, Expert

Projects

Project Title	Project Institution	Project Owner	Tags	Status
A GIS based model for wildlife conservation in Sri Lanka	Bridgewater State University	Thilina Surasinghe	mpi, performance, python	On Hold
Machine learning for material property prediction	University of Maine Orono	Northeast Cyberteam	big-data, data-wrangling, computational-chemistry, molecular-dynamics, machine-learning, python, gpus	Complete
Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations	University of Vermont	Juan Vanegas	bioinformatics, computational-chemistry, gromacs, hpc, molecular-dynamics, mpi, python, simulations	Complete
LOBO Fleet Monitoring	Darling Marine Center, University of Maine	Northeast Cyberteam	big-data, data-access-protocols, data-management, data-wrangling, metadata, file-formats, cloud, openstack, cyberinfrastructure, oceanography, python, software-installation, compiling, debugging	Complete
Using Agent Based Models on small world networks to understand disease transmission	University of Vermont, work will be remote	Jane Molofsky	python	Complete
Incorporating Hytools into the current image processing pipeline to produce better vegetation maps that will account for radiometric signals and will parallelize workflow	University of Maine at Fort Kent	Larry Whitsel	big-data, geographic-information-system, hpc-operations, image-processing, python, r, researcher-facing	Complete
Deep Learning High-Resolution Land Cover Mapping for Vermont	University of Vermont	Jarlath O'Neil-Dunne	arcgis, big-data, distributed-computing, geographic-information-system, image-processing, machine-learning, parallelism, python	Complete
Utility poles Geo-Localization and Risk Estimation using Deep Learning	University of Vermont	safwan wshah	ai, arcgis, big-data, conda, cuda, deep-learning, geographic-information-system, gpus, hpc, machine-learning, pip, python, tensorflow, unix-environment	Complete
Uncertainty Quantification for Urban Air Quality Modeling in Clermont-Ferrand, France	Stonehill College	Janelle Hammond	cluster, collaboration, hpc-getting-started, monte-carlo, python, simulations	Complete
UVM Art + AI Research Group Phase 2 (2021)	University of Vermont	Jennifer Karson	ai, cluster, collaboration, cuda, python, supercomputing, visualization	Complete

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