python

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Adam Carlson	Campus Champions	archiving backup bash cluster-management cluster-support cpu-architecture data-lifecycle data-management more...
Andrew Fullard	Campus Champions	astrophysics batch-jobs conda data-analysis fortran git jupyterhub machine-learning more...	big-data community-outreach cuda data-reproducibility easybuild machine-learning
Ami Gaspar	Campus Champions, Northeast	archiving backup cloud-computing community-outreach data-access-protocols data-compliance data-lifecycle data-management more...
Adrian Del Maestro	Northeast	batch-jobs c++ compiling data-management debugging gpu julia jupyterhub more...
Aaron Jezghani	Campus Champions	administering-hpc anaconda bash batch-jobs benchmarking c c++ checkpoint more...
Andrew Pasquale	ACCESS CSSN, At-Large, CCMNet	ACCESS-website ai git opencv python sql
Alyssa Pivirotto	ACCESS CSSN, Campus Champions	bash bioinformatics biology conda data-analysis data-science genomics github more...	arcgis machine-learning
Devin Bayly	ACCESS CSSN, Campus Champions, CCMNet	ACCESS-account adding-users affinity-group allocations-extension allocations-proposal batch-jobs community-outreach computer-graphics more...	ACCESS ACCESS-credits affinity-group allocations-extension computer-graphics computer-vision containers cuda more...
Brian Gregor	ACCESS CSSN, Northeast, Campus Champions	big-data debugging gpu hardware job-sizing machine-learning matlab mpi more...
Michael Blackmon	Campus Champions, ACCESS CSSN	administering-hpc anaconda bash batch-jobs c c++ cgroups cluster-support more...
Brett Milash	RMACC	bioinformatics python
Kevin Bryan	Campus Champions	acls bash c c++ cluster-management compiling conda debugging more...	archiving data-transfer deep-learning professional-development
Benjamin Meyers	Campus Champions	bash batch-jobs cybersecurity data-science dependencies git machine-learning natural-language-processing more...	administering-hpc bash batch-jobs conda cybersecurity data-analysis data-science dependencies more...
Carrie Brown	CAREERS, ACCESS CSSN, CCMNet	bioinformatics cleanup community-outreach data-wrangling distributed-computing genomics github github-pages more...
Christina Divoll	Campus Champions, ACCESS CSSN	acls Admin and Support administering-hpc bash cluster-support Data Storage data-lifecycle data-management more...	Cloud
Craig Gross	Campus Champions, CCMNet	bash c c++ conda data-analysis data-science git github more...
Christopher Bl…	Campus Champions	anaconda aws azure bash benchmarking c c++ cloud-commercial more...
Cody Stevens	Campus Champions, CCMNet	administering-hpc anaconda archiving aws backup bash batch-jobs benchmarking more...
Cesar Sul	ACCESS CSSN, Campus Champions	astrophysics bash batch-jobs c git job-array job-submission lmod more...	anaconda astrophysics bash batch-jobs benchmarking c checkpoint containers more...
David Oury	Northeast	programming programming-best-practices python r tensorflow unix-environment
Bala Desinghu	ACCESS CSSN, Campus Champions, CAREERS, Northeast	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Davide Del Vento		c python quantum-computing	conda containers hpc-storage jupyterhub quantum-computing scheduling spack
David Carlson	ACCESS CSSN	bash bioinformatics biology gatk genomics ookami python r more...
Daniel Morales	Campus Champions	ACCESS ACCESS-allocations ACCESS-credits adding-users allocation-management anaconda bash batch-jobs more...	ACCESS ACCESS-allocations allocation-management bioinformatics biology community-outreach conda deep-learning more...
Deborah Penchoff	Campus Champions	abstract ACCESS ACCESS-account adding-users affiliations ai allocation-management allocation-time more...
Daniel Howard	ACCESS CSSN, Campus Champions, CCMNet, RMACC	bash c c++ conda cuda deep-learning environment-modules finite-element-analysis more...	ACCESS-allocations affinity-group allocations-proposal benchmarking c c++ community-outreach conda more...
David Ryglicki		ai big-data computer-vision data-analysis deep-learning fortran generative-ai image-processing more...	ai astrophysics bash big-data computer-graphics computer-vision data-analysis data-science more...
Darshan Sarojini	ACCESS CSSN	community-outreach comsol fluid-dynamics mathematica matlab optimization paraview python more...	anaconda comsol finite-element-analysis fluid-dynamics linear-programming monte-carlo optimization parameter-sweeps more...
Elie Alhajjar	ACCESS CSSN, CCMNet	biology c++ community-outreach data-science julia mathematica matlab professional-development more...	ai big-data biology c++ community-outreach data-analysis data-science deep-learning more...
Edwin Posada	Campus Champions	administering-hpc bash batch-jobs benchmarking c c++ cluster-management cluster-support more...
Eden Furtak-Cole	Campus Champions	bash c c++ compiling finite-element-analysis fluid-dynamics git julia more...	bash c c++ data-analysis expanse git julia modules more...
Fan Chen	ACCESS CSSN	ACCESS-account ACCESS-allocations ai c cloud-computing cuda cybersecurity data-science more...	ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website ai bioinformatics c more...
Fernando Garzon	ACCESS CSSN	abstract ai aws bash batch-jobs big-data citation containers more...	ai aws azure bash batch-jobs big-data c c++ more...
Feseha Abebe-Akele	CCMNet	abstract ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website account adding-users more...
Ibrahim Sheikh	CAREERS	benchmarking community-outreach debugging deep-learning dependencies encryption gis git more...	backup benchmarking community-outreach computational-chemistry deep-learning file-formats gamess gis more...
Iman Rahbari	Campus Champions, ACCESS CSSN	bash comsol data-analysis fluid-dynamics fortran machine-learning matlab modules more...	abaqus ai anvil aws bash batch-jobs bridges-2 comsol more...
Yu-Chieh Chi	Campus Champions	anaconda bash batch-jobs c c++ computational-chemistry containers cuda more...
James Deaton	ACCESS CSSN, Campus Champions, Great Plains	archiving bash cgroups community-outreach conda containers data-wrangling hpc-storage more...
Jacob Fosso Tande	Campus Champions	administering-hpc azure bash c++ cluster-support community-outreach compiling computational-chemistry more...
Juanjo Garcia Mesa	Campus Champions, CCMNet	ACCESS-allocations bash batch-jobs bioinformatics c++ git jetstream job-array more...	generative-ai job-accounting llm mpi NAIRR-pilot natural-language-processing openmpi programming-best-practices more...
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud-storage cluster-support cyverse more...
John Goodhue	CAREERS, Northeast	programming python sciencedmz storage
Juan Vanegas	Northeast	bash batch-jobs bioinformatics compiling conda environment-modules hpc-cluster-build hpc-operations more...
Jeffrey Weekley	Campus Champions	administering-hpc archiving biology community-outreach condo containers cybersecurity data-compliance more...
Jason Wells	ACCESS CSSN, Campus Champions	administering-hpc api bash batch-jobs biology cluster-management cluster-support comsol more...
Jason Yalim	Campus Champions	administering-hpc bash benchmarking c c++ cpu-bound data-analysis data-management more...
Kali McLennan	Campus Champions, Great Plains	acls bash cgroups cifs cluster-management cluster-support compiling conda more...
Keri Toksu	Northeast, Campus Champions	bash batch-jobs natural-language-processing programming python resources scheduling slurm more...
Kyle Krick	ACCESS CSSN, Campus Champions	api azure cilogon containers docker git github github-pages more...	ACCESS-account ACCESS-credits ACCESS-website administering-hpc ai allocation-management aws cilogon more...
Katherine Nelson	Campus Champions, CAREERS, ACCESS CSSN	astrophysics bash batch-jobs cluster-support compiling conda debugging environment-modules more...	acls astrophysics bash batch-jobs c++ compiling conda debugging more...
Od Odbadrakh	ACCESS CSSN	ACCESS ACCESS-account ACCESS-allocations account affinity-group ai archiving bash more...	ACCESS account ai archiving bash batch-jobs benchmarking c more...
Kenneth Bundy	CAREERS	anaconda aws azure bash batch-jobs c c++ cloud-commercial more...
Lakitha Wijeratne	TRECIS	image-processing machine-learning matlab python slurm	c++ image-processing machine-learning matlab neural-networks python slurm
Thomas Langford	Campus Champions, CAREERS	big-data containers monte-carlo mpi parallelization particle-physics python quantum-mechanics more...
Lauren Hill-Beaton	CAREERS	anaconda arcgis conda gis netcdf open-ondemand pip programming more...	arcgis gis python
Lonnie Crosby	Campus Champions, ACCESS CSSN	bash benchmarking c c++ computational-chemistry containers cuda deep-learning more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Mohsen Ahmadkhani	CCMNet, ACCESS CSSN	ai bash batch-jobs big-data centos computer-vision conda containers more...	ACCESS administering-hpc ai allocation-management api arcgis aws azure more...
Martin Cuma	RMACC, Campus Champions	bash batch-jobs c++ compiling debugging distributed-computing environment-modules job-sizing more...	bash batch-jobs c++ compiling comsol conda containers cuda more...
Michael Kyle	Campus Champions	bash cybersecurity python research-facilitation sql	anaconda arcgis bash community-outreach conda cybersecurity data-analysis data-lifecycle more...
Mattie Niznik	Campus Champions	anaconda bash batch-jobs cluster-support compiling conda data-science docker more...	data-analysis data-science generative-ai git github github-pages html llm more...
Michael Puerrer	Campus Champions, Northeast	astrophysics bash benchmarking c c++ conda containers cuda more...
Maryam Taeb		abstract ai anaconda bash big-data community-outreach conda cybersecurity more...	abstract ai anaconda api bash big-data c citation more...
Nicholas Danes	Campus Champions, MINES	anaconda biology compiling cpu-bound distributed-computing fluid-dynamics fortran job-array more...	ai aws azure benchmarking big-data c c++ deep-learning more...
Nick Dusek	Campus Champions	administering-hpc anaconda bash batch-jobs bioinformatics compiling containers data-transfer more...
Nannan Shan	CCMNet, ACCESS CSSN	abstract ACCESS administering-hpc amber anaconda anvil api ase more...	ai aws azure cloud-computing containers data-science deep-learning kubernetes more...
Justin Oelgoetz	Campus Champions, CCMNet	abstract affiliations astrophysics bash benchmarking c c++ citation more...	administering-hpc ai amber astrophysics benchmarking c c++ charmm more...
Nicholas Panchy	Campus Champions	bash bioinformatics biology conda easybuild genomics modules open-ondemand more...
Mahmoud Parvizi	Campus Champions	astrophysics big-data cloud-computing data-analysis data-science machine-learning particle-physics python more...	deep-learning management neural-networks professional-development training
Mark Perri	Campus Champions	computational-chemistry docker gamess jetstream namd openstack programming python more...	computational-chemistry docker gamess jupyterhub molecular-dynamics namd python quantum-mechanics
Paul Rulis	Campus Champions	abstract affiliations ai bash batch-jobs c c++ checkpoint more...	abstract affiliations ai amber atlas bash batch-jobs benchmarking more...
Mike Renfro	Campus Champions, CCMNet	administering-hpc anaconda bash conda environment-modules fortran git github more...
Russell Hofmann	ACCESS CSSN, CCMNet	computational-chemistry data-analysis data-science dft gaussian genomics gromacs kubernetes more...	administering-hpc cluster-support computational-chemistry data-analysis data-science dft gaussian genomics more...
Rob Coyne	CAREERS	astrophysics python	astrophysics bash machine-learning mpi python scripting
Ron Rahaman	Campus Champions	anaconda bash batch-jobs benchmarking c c++ cluster-support compiling more...	containers cpu-architecture dependencies documentation gpu hpc-arch-and-perf programming-best-practices software-carpentry more...
Sean Anderson	Campus Champions, CCMNet	administering-hpc anaconda bash batch-jobs benchmarking cluster-support community-outreach compiling more...
Grant Scott	Great Plains	ai aws bash big-data c++ compiling containers cuda more...	management
Shawn Doughty	Campus Champions, Northeast	aws batch-jobs cgroups containers fastx file-systems globus gpu more...
Shane Sanders	Campus Champions	bioinformatics c c++ containers machine-learning programming python research-grants more...	archiving big-data data-analysis data-compliance data-lifecycle data-management data-reproducibility data-retention more...
Xiaoqin Huang	ACCESS CSSN	ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...	ACCESS-credits ACCESS-website adding-users affinity-group allocations-extension allocations-proposal amber anaconda more...
Shubha Kope	Campus Champions	aws benchmarking kubernetes lmod login password programming-best-practices putty more...	ACCESS-website administering-hpc ai archiving authentication aws backup bash more...
Swabir Silayi	ACCESS CSSN, CCMNet, Campus Champions	amber anaconda bash batch-jobs benchmarking c c++ checkpoint more...	administering-hpc cluster-management
Simon Delattre		anaconda bash big-data conda data-transfer data-wrangling deep-learning machine-learning more...	bioinformatics
Suhong Li	CAREERS, ACCESS CSSN	anaconda big-data cleanup data-analysis data-wrangling github machine-learning natural-language-processing more...
Soham Pal	ACCESS CSSN, Campus Champions, CCMNet	bash c++ conda file-formats git github github-pages jupyterhub more...
Spencer Pruitt	Northeast	batch-jobs computational-chemistry debugging distributed-computing hardware hpc-operations hpc-storage mpi more...
Sumit Saluja	Campus Champions	administering-hpc anaconda aws azure backup batch-jobs c c++ more...
William Sanders	Campus Champions	bioinformatics c c++ containers machine-learning programming python research-grants more...	archiving big-data data-analysis data-compliance data-lifecycle data-management data-reproducibility data-retention more...
Sebastian Sensale	Campus Champions	amber bash bridges-2 expanse lammps matlab molecular-dynamics namd more...
Shawn Sivy	Campus Champions, CAREERS	acls backup bash batch-jobs cifs compiling containers cuda more...	administering-hpc amber ansible astrophysics authentication backup bash biology more...
Steve Spicklemire	Campus Champions	c python react	aws big-data computational-chemistry cybersecurity data-analysis gce image-processing machine-learning more...
Tyler Burkett	Kentucky	aws bash c c++ containers cuda git github more...	networking quantum-mechanics
Timothy Middelkoop	ACCESS CSSN, Campus Champions, CCMNet, Great Plains	abstract ACCESS-allocations administering-hpc affinity-group ansible api aws azure more...	abstract ACCESS ACCESS-allocations ACCESS-credits administering-hpc ansible anvil api more...
Travis Ravert	CCMNet	bash git html open-ondemand python ruby unix-environment	programming programming-best-practices
Xiaoge Wang	Campus Champions	bash batch-jobs benchmarking c c++ centos checkpoint compiling more...
Wirawan Purwanto	Campus Champions, Northeast, ACCESS CSSN	bash batch-jobs c++ mpi python scripting	ai bash batch-jobs benchmarking big-data bioinformatics bridges-2 c more...
William Lai	ACCESS CSSN	administering-hpc ai anaconda archiving backup bash bioinformatics biology more...	administering-hpc ai archiving bash benchmarking big-data bioinformatics biology more...

Users

Name	Roles	Skills	Interests
Ami Gaspar	rcf	archiving backup cloud-computing community-outreach data-access-protocols data-compliance data-lifecycle data-management more...
Adrian Del Maestro	mentor researcher/educator	batch-jobs c++ compiling data-management debugging gpu julia jupyterhub more...
Andrew Pasquale	mentor	ACCESS-website ai git opencv python sql
Brian Gregor	mentor rcf	big-data debugging gpu hardware job-sizing machine-learning matlab mpi more...
Brendan Philbin	student facilitator	bash c++ cuda distributed-computing mathematica mpi parallelization programming more...	bash batch-jobs c++ cuda distributed-computing mathematica mpi parallelization more...
Christopher Gilbert	student facilitator	anaconda arcgis astrophysics community-outreach conda jupyterhub python quantum-mechanics more...
David Oury	mentor	programming programming-best-practices python r tensorflow unix-environment
Bala Desinghu	mentor researcher/educator rcf	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Daniel Evans	researcher/educator	c c++ cleanup compiling file-formats git programming project-management more...
Ethan Davis	student facilitator	bash batch-jobs big-data matlab python
George Avirappattu	researcher/educator	c++ deep-learning gis image-processing java machine-learning python pytorch more...
Halina Vercess…	student facilitator	anaconda c c++ github java mathematica matlab neural-networks more...
Jack Boynton	student facilitator researcher/educator	ai anaconda api aws bash batch-jobs benchmarking c++ more...
Jesse Franklin	student facilitator	mathematica matlab python
Jonathan Blanchard	student facilitator mentee	benchmarking file-systems github github-pages gpu hardware image-processing machine-learning more...	benchmarking file-systems github github-pages gpu hardware image-processing machine-learning more...
Jacob Pessin	mentor	aws bash batch-jobs big-data bioinformatics cloud-storage cluster-support cyverse more...
John Goodhue	mentor steering committee	programming python sciencedmz storage
Juan Vanegas	mentor	bash batch-jobs bioinformatics compiling conda environment-modules hpc-cluster-build hpc-operations more...
Keri Toksu	mentor rcf	bash batch-jobs natural-language-processing programming python resources scheduling slurm more...
Matt Ferguson	researcher/educator	ACCESS ai anaconda bash bioinformatics biology c charmm more...	ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website ai amber anaconda more...
Michael Puerrer	rcf	astrophysics bash benchmarking c c++ conda containers cuda more...
Neelaza Dahal	researcher/educator	python
Shawn Doughty	mentor rcf	aws batch-jobs cgroups containers fastx file-systems globus gpu more...
Spencer Pruitt	mentor	batch-jobs computational-chemistry debugging distributed-computing hardware hpc-operations hpc-storage mpi more...
Tolu Oyeniyi	student facilitator	anaconda bash lmod matlab programming putty python r more...	ai azure cluster-support image-processing jupyterhub linear-programming python r
Tyler Bloom	student facilitator	bash batch-jobs benchmarking c++ github monte-carlo optimization programming-best-practices more...
Alexander Williams	researcher/educator	bash big-data conda jupyterhub putty python react storage more...
Wirawan Purwanto	mentor rcf	bash batch-jobs c++ mpi python scripting	ai bash batch-jobs benchmarking big-data bioinformatics bridges-2 c more...
Yating Fang	student facilitator	bash c c++ data-analysis deep-learning linear-programming machine-learning matlab more...	anaconda bash big-data c c++ conda cuda data-analysis more...
Yves Dubief	researcher/educator	big-data molecular-dynamics mpi python	batch-jobs molecular-dynamics mpi programming programming-best-practices python

Projects

Project Title	Project Institution	Project Owner	Tags	Status
A GIS based model for wildlife conservation in Sri Lanka	Bridgewater State University	Thilina Surasinghe	python, mpi	Halted
Machine learning for material property prediction	University of Maine Orono	Northeast Cyberteam	big-data, data-wrangling, computational-chemistry, molecular-dynamics, machine-learning, python, gpu	Complete
Uncertainty Quantification for Urban Air Quality Modeling in Clermont-Ferrand, France	Stonehill College	Janelle Hammond	monte-carlo, python	Complete
Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations	University of Vermont	Juan Vanegas	bioinformatics, computational-chemistry, gromacs, molecular-dynamics, mpi, python	Complete
LOBO Fleet Monitoring	Darling Marine Center, University of Maine	Northeast Cyberteam	big-data, data-access-protocols, data-management, data-wrangling, metadata, file-formats, openstack, oceanography, python, software-installation, compiling, debugging	Complete
Using Agent Based Models on small world networks to understand disease transmission	University of Vermont, work will be remote	Jane Molofsky	python	Complete
Incorporating Hytools into the current image processing pipeline to produce better vegetation maps that will account for radiometric signals and will parallelize workflow	University of Maine at Fort Kent	Larry Whitsel	big-data, gis, hpc-operations, image-processing, python, r	Complete
Deep Learning High-Resolution Land Cover Mapping for Vermont	University of Vermont	Jarlath O'Neil-Dunne	arcgis, big-data, distributed-computing, gis, image-processing, machine-learning, python	Complete
Utility poles Geo-Localization and Risk Estimation using Deep Learning	University of Vermont	safwan wshah	ai, arcgis, big-data, conda, cuda, deep-learning, gis, gpu, machine-learning, pip, python, tensorflow, unix-environment	Complete
UVM Art + AI Research Group Phase 2 (2021)	University of Vermont	Jennifer Karson	ai, cuda, python	Complete

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	AI Institutes Cyberinfrastructure	Gathering place for AI researchers to find curated information about using ACCESS resources for AI applications and research.	ai machine-learning gpu python	Login to join

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Knowledge Base Resources

Title	Category	Tags	Skill Level
ACES: Charliecloud Containers for Scientific Workflows (Tutorial)	Learning	ACES, TAMU, scratch, lammps, tensorflow, open-ondemand, gpu, nfs, slurm, bash, training, python, containers	Beginner
Advanced Mathematical Optimization Techniques	Learning	optimization, python	Beginner, Intermediate, Advanced
AHPCC documentary	Docs	login, batch-jobs, slurm, bash, ssh, python, mpi	Beginner, Intermediate