bioinformatics

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Projects

Project Title	Project Institution	Project Owner	Tags	Status
Understanding Mechanical Properties of Bio-interfaces with HPC Molecular Simulations	University of Vermont	Juan Vanegas	simulations, molecular-dynamics, gromacs, bioinformatics, computational-chemistry, python, hpc, mpi	Complete
Genome Sequencing of the Bornean Rock Frog	Smith College	Lisa Mangiamele	big-data, bioinformatics, genomics	Recruiting
Big Data Portal For Sharing Real-world Bioinformatics Data Sets to the Public Domain	University of Maine, Augusta	Bruce Segee	Data-facing, big-data, data-handling, data-wrangling, data-management, storage (d-facing), metadata, bioinformatics, science gateway, website, hpc-storage (s-facing)	Recruiting

Student Facilitators

Name	Skills	Interests
Kendra Batchelder	bioinformatics r	image-processing simulations

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Brett Milash	RMACC	bioinformatics hpc python
Larry Feinstein	Northeast	bioinformatics simulations
Ying Zhang	CAREERS	bioinformatics hpc	bioinformatics deep-learning hpc
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud-storage (s-facing) cloud/vm cluster-support more...
Juan Vanegas	Northeast	bash batch-jobs bioinformatics compiling conda environment-modules hpc hpc-cluster-build more...
Rob Harbert	Northeast	anaconda array-job batch-jobs big-data bioinformatics biology cluster distributed-computing more...
Diana Dugas	RMACC, SWEETER	bioinformatics biology cyberinfrastructure genomics hpc-getting-started proposal-development research-computing research-facilitation more...

Researchers and Educators

Name	Skills	Interests
Michael Sundue	bioinformatics

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