big-data

Mentors and Regional Facilitators

Name	Region	Skills	Interests
Tony Elam	Kentucky	big-data data-management metadata professional-development
Alana Romanella	Campus Champions	affinity-group ai big-data community-outreach data-analysis data-science deep-learning documentation more...
Bala Desinghu	CAREERS	ai big-data community-outreach computational-chemistry data-analysis dft image-processing machine-learning more...
Brian Gregor	Northeast, Campus Champions	big-data debugging gpu hardware job-sizing machine-learning matlab mpi more...
Balamurugan Desinghu	ACCESS CSSN, Campus Champions, CAREERS, Northeast	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Dylan Perkins	RMACC, ACCESS CSSN	access-acount big-data	ACCESS-website batch-jobs core-hours cpu-architecture data-science documentation open-ondemand pegasus more...
Fernando Garzon	ACCESS CSSN	abstract ai aws bash batch-jobs big-data citation containers more...	ai aws azure bash batch-jobs big-data c c++ more...
Feng George Yu	Campus Champions	big-data data-management
Jordan Hayes	Campus Champions	acls administering-hpc amber anaconda api atlas aws bash more...
Jacob Pessin	Northeast	aws bash batch-jobs big-data bioinformatics cloud-storage cluster-support cyverse more...
Katia Bulekova	ACCESS CSSN, Campus Champions, CAREERS, Northeast	batch-jobs benchmarking big-data c c++ cuda data-analysis data-wrangling more...	batch-jobs benchmarking big-data c cloud-computing cuda data-analysis gcc more...
Thomas Langford	Campus Champions, CAREERS	big-data containers monte-carlo mpi parallelization particle-physics python quantum-mechanics more...
shuai liu	ACCESS CSSN	ai anaconda azure big-data bioinformatics biology containers data-analysis more...
Maryam Taeb		abstract ai anaconda bash big-data community-outreach conda cybersecurity more...	abstract ai anaconda api bash big-data c citation more...
Neil McGlohon	CAREERS	ai anaconda bash benchmarking big-data conda distributed-computing machine-learning more...	distributed-computing python
Jeffrey J. Nuc…	CAREERS	archiving bash big-data cluster-support community-outreach cybersecurity deep-learning file-systems more...
Mahmoud Parvizi	Campus Champions	astrophysics big-data cloud-computing data-analysis data-science machine-learning particle-physics python more...	deep-learning management neural-networks professional-development training
Rob Harbert	Northeast	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics geographic-information-system more...
Grant Scott	Great Plains	ai aws bash big-data c++ compiling containers cuda more...	management
Simon Delattre		anaconda bash big-data conda data-transfer data-wrangling deep-learning machine-learning more...	bioinformatics
Suhong Li	CAREERS, ACCESS CSSN	anaconda big-data cleanup data-analysis data-wrangling github machine-learning natural-language-processing more...
Scott Valcourt	Northeast, Campus Champions	bash batch-jobs big-data compiling data-lifecycle data-management distributed-computing doi more...
Yun Shen	CAREERS, Northeast, ACCESS CSSN	big-data bioinformatics data-analysis data-science genomics open-ondemand programming PROGRAMMING LANGUAGES FRAMEWORKS AND IDEs more...
Yongwook Song	Kentucky	azure big-data deep-learning machine-learning tensorflow

Topics from Ask.CI

Affinity Groups

	Name	Description	Tags	Join
	Large Data Sets	For people who evaluate or use storage options for researchers with large data sets.	cloud-storage big-data data-transfer open-storage-network s3 ceph hpc-storage	Login to join
	DARWIN	DARWIN (Delaware Advanced Research Workforce and Innovation Network) is a big data and high performance computing system designed to catalyze Delaware research and education funded by a $1.4 million…	darwin big-data	Login to join

Users

Name	Roles	Skills	Interests
Abigail Waters	student facilitator student facilitator student champion	big-data image-processing	big-data image-processing r
Brian Gregor	mentor rcf	big-data debugging gpu hardware job-sizing machine-learning matlab mpi more...
Balamurugan Desinghu	mentor rcf	ai anaconda api bash batch-jobs benchmarking big-data bioinformatics more...	affinity-group ai allocations-proposal amber anaconda archiving backup bash more...
Ethan Davis	student facilitator	bash batch-jobs big-data matlab python
Jacob Pessin	mentor	aws bash batch-jobs big-data bioinformatics cloud-storage cluster-support cyverse more...
Katia Bulekova	mentor rcf	batch-jobs benchmarking big-data c c++ cuda data-analysis data-wrangling more...	batch-jobs benchmarking big-data c cloud-computing cuda data-analysis gcc more...
Kristi Burkholder	researcher/educator	big-data data-management hpc-storage storage
Northeast Cyberteam	student facilitator	big-data
Rob Harbert	mentor	anaconda batch-jobs big-data bioinformatics biology distributed-computing genomics geographic-information-system more...
safwan wshah	researcher/educator	ai big-data deep-learning image-processing machine-learning programming software-installation
Scott Valcourt	mentor researcher/educator rcf steering committee	bash batch-jobs big-data compiling data-lifecycle data-management distributed-computing doi more...
Alexander Williams	researcher/educator	bash big-data conda jupyterhub putty python react storage more...
Yves Dubief	researcher/educator	big-data molecular-dynamics mpi python	batch-jobs molecular-dynamics mpi programming programming-best-practices python
Yun Shen	mentor	big-data bioinformatics data-analysis data-science genomics open-ondemand programming PROGRAMMING LANGUAGES FRAMEWORKS AND IDEs more...

CI Links

Title	Category Sort descending	Tags	Skill Level
DARWIN Documentation Pages	Docs	darwin, big-data	Beginner, Intermediate, Advanced
Introduction to Python for Digital Humanities and Computational Research	Docs	ai, big-data, data-analysis, deep-learning, data-science, python	Beginner
Introductory Tutorial to Numpy and Pandas for Data Analysis	Docs	ai, big-data, data-analysis, vectorization	Beginner
PyTorch for Deep Learning and Natural Language Processing	Docs	ai, big-data, data-analysis, deep-learning, machine-learning, neural-networks	Beginner
Machine Learning in Astrophysics	Docs	plotting, big-data, image-processing, machine-learning, astrophysics	Intermediate
Pandas - Python	Docs	documentation, ai, big-data, data-analysis	Beginner, Intermediate
ACCESS HPC Workshop Series	Learning	big-data, deep-learning, machine-learning, neural-networks, tensorflow, gpu, technical-training-for-hpc, training, openmpi, c, c++, fortran, openmp, programming, mpi, spark	Beginner, Intermediate
DeapSECURE – Data-Enabled Advanced Computational Training Platform for Cybersecurity Research and Education	Learning	ai, visualization, big-data, data-analysis, deep-learning, machine-learning, neural-networks, jekyll, batch-jobs, slurm, bash, ssh, technical-training-for-hpc, training, workforce-development, python, scikit-learn, cybersecurity	Beginner
Research Software Development in JupyterLab: A Platform for Collaboration Between Scientists and RSEs	Learning	ai, visualization, big-data, data-analysis, deep-learning, machine-learning, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, ondemand, science gateway, c++, jupyterhub, python, r	Beginner, Intermediate
Awesome Jupyter Widgets (for building interactive scientific workflows or science gateway tools)	Learning	ai, computer-graphics, plotting, visualization, big-data, data-analysis, deep-learning, image-processing, machine-learning, monte-carlo, neural-networks, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, github, astrophysics, data-science, novel-accelerators, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, ondemand, science gateway, c++, jupyterhub, python	Beginner, Intermediate, Advanced
Machine Learning with sci-kit learn	Learning	ai, big-data, machine-learning	Beginner
Numpy - a Python Library	Tool	documentation, big-data, data-analysis, deep-learning, opencv, pytorch, tensorflow, data-science	Beginner, Intermediate
Scikit-Learn: Easy Machine Learning and Modeling	Tool	documentation, ai, plotting, visualization, big-data, data-analysis, deep-learning, image-processing, machine-learning, monte-carlo, neural-networks, vectorization	Beginner, Intermediate
Beautiful Soup - Simple Python Web Scraping	Tool	documentation, ai, big-data, data-sharing, data-transfer, data-wrangling	Beginner, Intermediate
Python Tools for Data Science	Video	ai, big-data, data-analysis, machine-learning, data-wrangling, data-science, technical-training-for-hpc, training, workforce-development, python, scikit-learn, sql	Intermediate
Displaying Scientific Data with Tableau	Video	big-data, data-analysis, technical-training-for-hpc, training, workforce-development	Intermediate
Expanse Home Page	Website	big-data	Beginner, Intermediate, Advanced
Recommended Libraries for Cyberinfrastructure Users Developing Jupyter Notebooks	Website	ai, big-data, data-analysis, machine-learning, data-sharing, data-lifecycle, data-management, data-management-software, data-reproducibility, data-wrangling, github-pages, workflow, astrophysics, data-science, computational-chemistry, genomics, materials-science, gravitational-waves, oceanography, particle-physics, physiology, psychology, quantum-computing, quantum-mechanics, biology, science gateway, conda, jupyterhub, python	Beginner, Intermediate, Advanced

Projects

Project Title	Project Institution Sort descending	Project Owner	Tags	Status
LOBO Fleet Monitoring	Darling Marine Center, University of Maine	Northeast Cyberteam	big-data, data-access-protocols, data-management, data-wrangling, metadata, file-formats, openstack, oceanography, python, software-installation, compiling, debugging	Complete
Genome Sequencing of the Bornean Rock Frog	Smith College	Lisa Mangiamele	big-data, bioinformatics, genomics	In Progress
Using Genetic Algorithms and Support Vector Machines in Forest Mapping	University of Maine	Kasey Legaard	big-data, compiling, data-management, machine-learning, matlab, neural-networks, openstack, parallelization, programming, workflow	Complete
Incorporating Hytools into the current image processing pipeline to produce better vegetation maps that will account for radiometric signals and will parallelize workflow	University of Maine at Fort Kent	Larry Whitsel	big-data, geographic-information-system, hpc-operations, image-processing, python, r	Complete
Analyzing Pathogenic Clinical Isolates Genomes to Identify Horizontal Gene Transfer of Antibiotic-Resistance Genes	University of Maine at Presque Isle	Larry Whitsel	big-data, bioinformatics, hpc-storage	Complete
Student-led Development of Open Source Materials for Hadoop	University of Maine Farmington	Northeast Cyberteam	big-data, ceph, data-wrangling, hadoop, storage	Complete
Machine learning for material property prediction	University of Maine Orono	Northeast Cyberteam	big-data, data-wrangling, computational-chemistry, molecular-dynamics, machine-learning, python, gpu	Complete
Big Data Portal For Sharing Real-world Bioinformatics Data Sets to the Public Domain	University of Maine, Augusta	Bruce Segee	big-data, bioinformatics, data-management, data-wrangling, hpc-storage, metadata, science gateway, storage	Complete
Student-Developed HPC Cluster for Active Learning	University of New Hampshire	Scott Valcourt	big-data, hardware, hpc-cluster-build, hpc-operations	Complete
BTLE Beaconing to Track Objects	University of New Hampshire	Scott Valcourt	big-data, programming-best-practices, programming, hardware	Complete
Benchmarking Locally-Developed HPC Resources	University of New Hampshire	Scott Valcourt	backup, big-data, data-management, file-systems, hpc-cluster-build, hpc-operations, permissions, provisioning, schedulers, slurm, unix-environment	Complete
Deep Learning High-Resolution Land Cover Mapping for Vermont	University of Vermont	Jarlath O'Neil-Dunne	arcgis, big-data, distributed-computing, geographic-information-system, image-processing, machine-learning, python	Complete
Utility poles Geo-Localization and Risk Estimation using Deep Learning	University of Vermont	safwan wshah	ai, arcgis, big-data, conda, cuda, deep-learning, geographic-information-system, gpu, machine-learning, pip, python, tensorflow, unix-environment	Complete
Simulate and design “xenobots”, on the AMD platform	University of Vermont	Andrea Elledge	administering-hpc, amber, big-data, biology, file-transfer, github, slurm	Complete
Genetics and Big Data	UVM	Northeast Cyberteam	big-data	Complete

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