People

Feseha Abebe-Akele

Elizabeth City State University

Assistant Professor

Programs

CCMNet

Skills

password account login profile generative-ai unsupervised-learning supervised-learning machine-learning big-data data-analysis cloud-computing cloud-open-source archiving backup data-access-protocols data-sharing data-transfer data-wrangling database file-formats file-system workflow storage sftp quota metadata github-pages github file-transfer benchmarking scaling gatk api galaxy file-systems hpc-operations unix-environment bash os permissions screen scripting ssh tmux vim git ACCESS ACCESS-account ACCESS-allocations ACCESS-credits ACCESS-website adding-users allocation-management allocations-proposal allocations-extension project-renewal SU bridges-2 stampede3 stampede2 ranch jetstream abstract affiliations citation community-outreach mentorship professional-development workforce-development training research-grants research-facilitation proposal-development xsede publication-database c compiling conda gcc gui java mpi sas r python programming-best-practices programming perl openmpi sql xml slurm process-killed pending-jobs batch-jobs job-submission bioinformatics biology data-science genomics putty vpn duo data-compliance centos dependencies docker library-paths software-installation singularity pip documentation trinity containers

John Acheampong

Cuny SPS

Programs

CAREERS

Skills

python programming-best-practices software-installation conda biology github

Kenneth Acosta

Rutgers, the State University of New Jersey

Programs

CAREERS, ACCESS CSSN

Skills

bioinformatics bash python r scripting conda pip unix-environment ssh vpn biology github genomics sftp

Eren Ada

University of Rhode Island

Programs

CAREERS

Skills

big-data community-outreach software-carpentry bioinformatics fastx gatk biology git github java r anaconda bash docker openmp compiling rstudio-server jupyterhub dependencies vim

Elie Alhajjar

United States Military Academy

Programs

ACCESS CSSN, CCMNet

Skills

Ana Ayala Pazzi

University of Texas Rio Grande Valley

Programs

ACCESS CSSN

Skills

biology

Rebecca Belshe

Arizona State University

Programs

Campus Champions, CCMNet

Skills

documentation tickets reporting proposal-request errors ai plotting vectorization visualization parameter-sweeps big-data computer-graphics data-analysis globus github-pages github file-transfer data-sharing data-transfer data-wrangling benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling pytorch tensorflow open-ondemand science-gateway xdmod cluster cluster-support gpu distributed-computing htc nvidia bash cleanup environment-modules git modules scripting ssh tmux vim vm ACCESS ACCESS-account ACCESS-allocations ACCESS-credits allocations-proposal ACCESS-website affinity-group jetstream stampede2 stampede3 abstract affiliations citation community-outreach management professional-development mentorship project-management workforce-development training software-carpentry research-grants research-facilitation publication-database proposal-development xsede anaconda c c++compiling conda gcc r matlab sas rstudio-server spss stata batch-jobs core-hours job-accounting job-array job-failure job-sizing job-submission slurm scheduling schedulers resources data-science psychology oceanography dependencies

Nihar Biradar

Rutgers University

Programs

CAREERS

Skills

programming c++java python api github neural-networks git programming-best-practices cleanup matlab optimization memory performance-tuning

Christopher Blanton, Ph.D.

North Carolina State University

Programs

Campus Champions

Skills

Alexandra Bozan

Rutgers, The State University of New Jersey,

Programs

Skills

data-analysis data-wrangling project-management biology machine-learning pytorch scikit-learn github version-control python sql anaconda scripting conda debugging pip

Wesley Brashear

Texas A&M University

Programs

ACCESS CSSN, Campus Champions

Skills

r python bioinformatics biology genomics

David Carlson

SUNY at Stony Brook

Programs

ACCESS CSSN, OnDemand

Skills

gatk trinity bash ookami research-facilitation python r slurm bioinformatics genomics biology singularity

Frédéric Chevalier

Texas Biomedical Research Institute

Programs

Campus Champions

Skills

Hening Cui

Columbia University

Programs

CAREERS

Skills

data-analysis sas bioinformatics biology machine-learning scikit-learn neural-networks natural-language-processing programming cleanup java python r sql

Nicholas Danes

Colorado School of Mines

Computational Scientist

Programs

Campus Champions, MINES

Skills

fluid-dynamics anaconda distributed-computing cpu-bound performance-tuning compiling software-installation mpi pip biology fortran python research-facilitation job-array

Gregory Ezike

New Jersey Institute of Technology

Programs

CAREERS

Skills

biology github programming c++c java python sql mpi vm vim bash

Jeff Falgout

United States Geological Survey

Programs

Campus Champions, RMACC

Skills

William Feng

Rutgers University-New Brunswick

Programs

CAREERS

Skills

genomics biology java r python programming programming-best-practices sql bioinformatics data-analysis

Matt Ferguson

Boise State University

Associate Professor of Physics

Programs

At-Large

Skills

Rob Harbert

Stonehill College

Assistant Professor of Biology and Bioinformatics

Programs

Northeast

Skills

anaconda biology github big-data bioinformatics genomics gis r sas distributed-computing batch-jobs sftp ssh open-ondemand

Chris Hemme

University of Rhode Island

Bioinformatics Core Director

Programs

CAREERS

Skills

big-data bioinformatics r data-analysis anaconda genomics biology

Xiaoqin Huang

Rice University

Programs

ACCESS CSSN

Skills

ACCESS-account ACCESS-credits adding-users affinity-group allocations-extension allocations-proposal anvil bridges-2 darwin delta documentation expanse rockfish stampede2 transfer-su xdmod tickets data-analysis deep-learning dft machine-learning neural-networks openstack globus github benchmarking checkpoint debugging memory optimization parallelization performance-tuning profiling scaling scripting amber bioinformatics charmm gamess gaussian gromacs lammps molecular-dynamics namd pytorch tensorflow biology computational-chemistry data-science genomics quantum-mechanics open-ondemand cgroups condo gpu nvidia batch-jobs schedulers job-array bash git pthreads ssh proposal-development research-facilitation research-grants community-outreach anaconda c c++compiling conda cuda fortran jupyterhub mpi openmp openmpi programming python containers dependencies easybuild docker interactive-mode pip singularity software-installation

James Hutcheson

Baylor University

Programs

Campus Champions, ACCESS CSSN

Skills

Aaron Jezghani

Georgia Institute of Technology

Programs

Campus Champions

Skills

People

Skills

Organization

Program